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Indonesia illegally occupied East Timor from 1975 until 2002. During that time, the Indonesian Armed Forces (TNI) and some 24 local militia groups in favour of Indonesian autonomy targeted the civilian population, particularly those suspected of being independence supporters. In September 1999, a referendum was held in which the Timorese people voted overwhelmingly in favour of independence. As a result of this vote, members of the Besih Merah Putih (BMP) militia group launched a renewed campaign against independence supporters. In the course of this campaign, a number of villages were attacked, houses burnt down and individuals murdered or deported to West Timor.

Anastacio Martins and Domingos Goncalves were BMP members who were convicted by the Special Panels for Serious Crimes for their role in these attacks. Martins was convicted for two counts of murder as a crime against humanity and sentenced to 11 years 6 months’ imprisonment after pleading guilty; Goncalves was convicted for one count of murder and one count of deportation as crimes against humanity and received a 15-year sentence. The judgment is particularly noteworthy because the Special Panels disagreed with an earlier Court of Appeal decision and held that the applicable law in 1999 and therefore the law to be applied by the Panels was Indonesian, and not Portuguese. 

During the outbreak of violence before, during and after the referendum on independence of East Timor from Indonesia, Marculino Soares was a Besi Merah Putih (BMP) militia commander from the village of Guico, in the district of Liquiça. The BMP militia was an anti-independence militia. On 17 April 1999, the house of Manuel Carrascalão, a pro-independence leader, was attacked, resulting in the death of 12 persons, and serious injuries to 9 others. On that day, Marculino Saores had ordered his men to go to a rally in Dili, from where the attack was launched. The group led by Marculino Soares joined the attack. Marculino Soares was indicted on 25 July 2003 by the Special Panel for Serious Crimes for participating in the attack, and charged with crimes against humanity, on the basis of individual and command responsibility.

The Court found that it had been proven that Marculino Soares personally participated in the organization and execution of the attack. Marculino Soares was convicted of crimes against humanity (murder, other inhumane acts and persecution) and sentenced to 15 years in prison (13 for the count of murder and 2 years for the count of other inhumane acts).

From 1985 to 1994, Vincent Rutaganira was conseiller communal (councilor)of Mubuga sector in Kibuye prefecture. On 6 May 1996, the Prosecutor of ICTR charged him with seven counts including genocide, conspiracy to commit genocide, murder, extermination and other inhumane acts as crimes against humanity, as well as war crimes.

On 7 December 2004, the Prosecutor and the Accused reached an agreement, pursuant to which the latter pleaded guilty to count 16 of the indictment charging him with extermination by omission as a crime against humanity for the massacres against Tutsi civilians at Mubuga church between 14 and 17 April 1994. The Trial Chamber acquitted the Accused on the other charged for lack of evidence.

The Chamber sentenced Rutaganira to 6 years of imprisonment. It took into consideration several mitigating factors including his voluntary surrender to the Tribunal in March 2002, his guilty plea, his good behaviour while in detention, his advanced age of 60 and his ill health. The Chamber further took into account the Accused’s expression of remorse, the assistance he had provided to some victims in Mubuga sector, as well as the lack of previous criminal record.  

The accused were all members of the Vukovar Territorial Defence force (TO) or of the volunteer unit called “Leva Supoderica”.

On 18 November 1991, members of the Croatian armed forces surrendered themselves to the Yugoslav People's Army (JNA). As a result, they had to enjoy certain rights and protection under international law because they were prisoners of war. For instance, they had to be treated humanely, should not be beaten or killed. Nevertheless, they were taken to the Ovčara farm in the Vukovar municipality on 20 and 21 November 1991, where they were brutally beaten, injured, and killed by members of the TO force (including the accused). Approximately 200 Croatians were killed at the Ovčara farm.

Dragan Damjanović, born in Sarajevo on 23 November 1961, was an ethnic Serb citizen of Bosnia-Herzegovina. Damjanović was a member of the Republika Srpska Army, and was accused and found guilty of crimes against humanity (murder, enforced disappearance, and sexual crimes amongst others) committed in Vogošća municipality between July 1992 and January 1993. The Court of Bosnia and Herzegovina sentenced him to 20 years imprisonment to be served in fully closed prisons under strict control.